TV-1 (Indian tea)


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S.No Tea-circ-Id Scaffold Start End Strand Parental Gene circRNA Length circ_exon coordinates circ_exon_count BSJ_read_count Type Direction Expression
3001 TV1_circR-3001 Scaffold10148 152785 152874 + TEA014324 90 152785-152874, 1 1 exonic antisense Expressed in all
3002 TV1_circR-3002 Scaffold10148 474214 474359 - TEA014323 146 474214-474359, 1 1 exonic antisense Expressed in all
3003 TV1_circR-3003 Scaffold10418 261062 261154 + n/a 93 261062-261154, 1 1 intronic sense Group-Enriched
3004 TV1_circR-3004 Scaffold10492 1028530 1028609 + n/a 80 1028530-1028609, 1 2 intronic sense Group-Enriched
3005 TV1_circR-3005 Scaffold10492 1028532 1028609 + n/a 78 1028532-1028609, 1 2 intronic sense Not Expressed
3006 TV1_circR-3006 Scaffold10492 1029627 1029682 + TEA004327 56 1029627-1029682, 1 1 exonic sense Expressed in all
3007 TV1_circR-3007 Scaffold10592 175774 175892 + TEA025017 119 175774-175892, 1 1 exonic sense Expressed in all
3008 TV1_circR-3008 Scaffold10603 468725 468785 - TEA000805 61 468725-468785, 1 1 exonic sense Expressed in all
3009 TV1_circR-3009 Scaffold10722 154468 326239 + TEA012032 336 154468-154586,154774-154984,326234-326239, 3 8 exonic sense Not Expressed
3010 TV1_circR-3010 Scaffold10722 156067 327749 + TEA012032 157 156067-156217,327744-327749, 2 2 exonic sense Not Expressed
3011 TV1_circR-3011 Scaffold10750 162264 162322 + TEA009696 59 162264-162322, 1 1 exonic sense Group-Enriched
3012 TV1_circR-3012 Scaffold10799 369462 369545 + TEA021393 84 369462-369545, 1 1 exonic antisense Expressed in all
3013 TV1_circR-3013 Scaffold10805 340344 340435 - n/a 92 340344-340435, 1 1 intergenic antisense Expressed in all
3014 TV1_circR-3014 Scaffold10805 419784 419926 - TEA030945 143 419784-419926, 1 2 exonic sense Expressed in all
3015 TV1_circR-3015 Scaffold11114 189223 189295 + n/a 73 189223-189295, 1 1 intergenic antisense Group-Enriched
3016 TV1_circR-3016 Scaffold11129 539531 539660 + n/a 130 539531-539660, 1 1 intronic antisense Expressed in all
3017 TV1_circR-3017 Scaffold11129 550024 550096 + n/a 73 550024-550096, 1 1 intronic antisense Expressed in all
3018 TV1_circR-3018 Scaffold11150 109266 109441 + n/a 176 109266-109441, 1 1 intronic sense Expressed in all
3019 TV1_circR-3019 Scaffold11150 109431 109535 + n/a 105 109431-109535, 1 2 intronic sense Expressed in all
3020 TV1_circR-3020 Scaffold11150 310376 310512 + n/a 137 310376-310512, 1 1 intergenic antisense Tissue-Enriched: Flower_bud
3021 TV1_circR-3021 Scaffold11150 310406 310512 + n/a 107 310406-310512, 1 1 intergenic antisense Not Expressed
3022 TV1_circR-3022 Scaffold11150 327911 327972 + n/a 62 327911-327972, 1 1 intergenic antisense Expressed in all
3023 TV1_circR-3023 Scaffold11150 328654 328726 + n/a 73 328654-328726, 1 1 intergenic antisense Expressed in all
3024 TV1_circR-3024 Scaffold11150 329365 329445 + n/a 81 329365-329445, 1 2 intergenic antisense Group-Enriched
3025 TV1_circR-3025 Scaffold11188 713564 713656 - n/a 93 713564-713656, 1 1 intergenic sense Expressed in all
3026 TV1_circR-3026 Scaffold11425 53557 54494 - TEA011591 133 53557-53658,54464-54494, 2 2 exonic sense Expressed in all
3027 TV1_circR-3027 Scaffold11516 33221 62488 - n/a 201 33221-33304,35656-35766,62483-62488, 3 5 intergenic sense Expressed in all
3028 TV1_circR-3028 Scaffold11594 352900 352994 - n/a 95 352900-352994, 1 2 intergenic sense Group-Enriched
3029 TV1_circR-3029 Scaffold11723 217767 217891 + TEA030472 125 217767-217891, 1 2 exonic sense Expressed in all
3030 TV1_circR-3030 Scaffold11723 436404 436468 + TEA030467 65 436404-436468, 1 1 exonic sense Expressed in all
3031 TV1_circR-3031 Scaffold12447 399684 399746 + n/a 63 399684-399746, 1 1 intergenic sense Expressed in all
3032 TV1_circR-3032 Scaffold12447 702043 702139 - n/a 97 702043-702139, 1 1 intergenic sense Group-Enriched
3033 TV1_circR-3033 Scaffold12505 305383 306409 - TEA031936 74 305383-305441,306395-306409, 2 2 exonic sense Expressed in all
3034 TV1_circR-3034 Scaffold12568 197238 197463 - n/a 226 197238-197463, 1 1 intronic antisense Expressed in all
3035 TV1_circR-3035 Scaffold12568 226719 233545 + TEA001076 138 226719-226805,233495-233545, 2 1 exonic sense Expressed in all
3036 TV1_circR-3036 Scaffold12568 238341 238424 - n/a 84 238341-238424, 1 1 intergenic antisense Tissue-Enhanced: 3rd_leaf
3037 TV1_circR-3037 Scaffold12623 75297 93782 + TEA021400 394 75297-75684,93777-93782, 2 7 exonic sense Expressed in all
3038 TV1_circR-3038 Scaffold13119 233065 233153 - n/a 89 233065-233153, 1 1 intergenic sense Expressed in all
3039 TV1_circR-3039 Scaffold13595 442916 448420 - n/a 155 442916-442921,448272-448420, 2 2 intergenic antisense Mixed2
3040 TV1_circR-3040 Scaffold13595 443858 451711 - n/a 284 443858-443863,451434-451711, 2 6 intergenic antisense Group-Enriched
3041 TV1_circR-3041 Scaffold13658 156581 156773 + n/a 66 156581-156607,156735-156773, 2 1 intergenic sense Expressed in all
3042 TV1_circR-3042 Scaffold13658 595535 679129 + n/a 147 595535-595568,595838-595944,679124-679129, 3 2 n/a n/a Expressed in all
3043 TV1_circR-3043 Scaffold14707 313523 313612 - TEA010563 90 313523-313612, 1 1 exonic sense Expressed in all
3044 TV1_circR-3044 Scaffold14763 425825 425917 - TEA005626 93 425825-425917, 1 1 exonic sense Expressed in all
3045 TV1_circR-3045 Scaffold14909 22949 119593 - TEA016866 95 22949-22954,119505-119593, 2 2 exonic sense Expressed in all
3046 TV1_circR-3046 Scaffold15720 1773 1948 - n/a 176 1773-1948, 1 3 n/a n/a Group-Enriched
3047 TV1_circR-3047 Scaffold16544 46820 50764 + TEA005195 132 46820-46855,50578-50634,50726-50764, 3 1 exonic sense Expressed in all
3048 TV1_circR-3048 Scaffold16544 51077 51440 + TEA005195 77 51077-51112,51400-51440, 2 1 exonic sense Expressed in all
3049 TV1_circR-3049 Scaffold16639 13043 13350 + n/a 308 13043-13350, 1 4 intergenic sense Expressed in all
3050 TV1_circR-3050 Scaffold19580 130127 134280 - TEA008025 125 130127-130132,134162-134280, 2 9 exonic sense Expressed in all
3051 TV1_circR-3051 Scaffold30085 52 1882 - n/a 168 52-57,1721-1882, 2 31 n/a n/a Expressed in all
3052 TV1_circR-3052 Scaffold34215 12108 12457 - n/a 350 12108-12457, 1 4 n/a n/a Expressed in all

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Funded by National Tea Research Foundation (NTRF), Kolkata.

Developed by ICAR-National Institute for Plant Biotechnology (NIPB), Delhi